Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | EC17GD31 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Genome Summary
Escherichia coli strain EC17GD31 chromosome, complete genome.
Gene Summary
Adenine Count
1232855 bp
Thymine Count
1232397 bp
Guanine Count
1257098 bp
Cytosine Count
1253482 bp
Genome Length
4975832 bp
Protein-coding Genes
4515 genes
Non-Coding Genes
289 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | DWB25_RS13990 | Not Available | Negative | 2906989 - 2907288 | 11352.2 |
| hcp family type vi secretion system effector | DWB25_RS13995 | Not Available | Negative | 2907341 - 2907820 | 17629.1 |
| vasl domain-containing protein | DWB25_RS14000 | Not Available | Negative | 2907842 - 2909197 | 50538.3 |
| type vi secretion system membrane subunit tssm | DWB25_RS14005 | Not Available | Negative | 2909208 - 2912639 | 131079.0 |
| type vi secretion system protein tssa | DWB25_RS14010 | Not Available | Negative | 2912748 - 2914175 | 52580.4 |
| type vi secretion system-associated protein vasi | DWB25_RS14015 | Not Available | Negative | 2914180 - 2914923 | 26349.6 |
| type vi secretion system atpase tssh | DWB25_RS14020 | Not Available | Negative | 2914920 - 2917658 | 99822.7 |
| type ivb secretion system protein icmh/dotu | DWB25_RS14025 | Not Available | Negative | 2917670 - 2918488 | 31405.3 |
| type vi secretion system baseplate subunit tssk | DWB25_RS14030 | Not Available | Negative | 2918493 - 2919836 | 49622.8 |
| type vi secretion system lipoprotein tssj | DWB25_RS14035 | Not Available | Negative | 2919839 - 2920342 | 18516.9 |
Pathways
12799 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





