Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | BE104 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1176476 bp
Thymine Count
1174817 bp
Guanine Count
1212144 bp
Cytosine Count
1211685 bp
Genome Length
4775122 bp
Protein-coding Genes
4377 genes
Non-Coding Genes
324 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| Dna packaging protein | FGC38_RS04640 | Not Available | Positive | 915479 - 917404 | 73305.5 |
| Head-tail joining protein | FGC38_RS04645 | Not Available | Positive | 917401 - 917607 | 7613.19 |
| Capsid component | FGC38_RS04650 | Not Available | Positive | 917604 - 919205 | 59468.9 |
| Capsid component | FGC38_RS04655 | Not Available | Positive | 919186 - 920505 | 45942.4 |
| Head-dna stabilization protein | FGC38_RS04660 | Not Available | Positive | 920515 - 920847 | 11572.5 |
| Capsid component | FGC38_RS04665 | Not Available | Positive | 920903 - 921928 | 38190.4 |
| Dna packaging protein | FGC38_RS04670 | Not Available | Positive | 921970 - 922368 | 14308.9 |
| Head-tail joining protein | FGC38_RS04675 | Not Available | Positive | 922380 - 922733 | 12761.8 |
| Tail component | FGC38_RS04680 | Not Available | Positive | 922745 - 923323 | 21562.0 |
| Tail component | FGC38_RS04685 | Not Available | Positive | 923320 - 923715 | 14649.9 |
Pathways
12367 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





