Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | BE104 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1176476 bp
Thymine Count
1174817 bp
Guanine Count
1212144 bp
Cytosine Count
1211685 bp
Genome Length
4775122 bp
Protein-coding Genes
4377 genes
Non-Coding Genes
324 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| deda family protein | FGC38_RS00310 | Not Available | Positive | 71351 - 72115 | 28245.8 |
| thiamine abc transporter atp-binding protein thiq | FGC38_RS00315 | Not Available | Negative | 72229 - 72927 | 25000.8 |
| thiamine/thiamine pyrophosphate abc transporter permease thip | FGC38_RS00320 | Not Available | Negative | 72911 - 74521 | 59536.7 |
| thiamine abc transporter substrate binding subunit | FGC38_RS00325 | Not Available | Negative | 74497 - 75480 | 36165.2 |
| dna-binding transcriptional regulator sgrr | FGC38_RS00330 | Not Available | Negative | 75644 - 77299 | 63978.7 |
| glucose uptake inhibitor sgrt | FGC38_RS00335 | Not Available | Positive | 77388 - 77519 | 5338.42 |
| sugar efflux transporter seta | FGC38_RS00340 | Not Available | Positive | 77621 - 78799 | 42715.8 |
| 3-isopropylmalate dehydratase small subunit | FGC38_RS00345 | Not Available | Negative | 78848 - 79453 | 22488.7 |
| 3-isopropylmalate dehydratase large subunit | FGC38_RS00350 | Not Available | Negative | 79464 - 80864 | 49884.7 |
| 3-isopropylmalate dehydrogenase | FGC38_RS00355 | Not Available | Negative | 80867 - 81958 | 39519.3 |
Pathways
12367 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





