Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | BE104 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1176476 bp
Thymine Count
1174817 bp
Guanine Count
1212144 bp
Cytosine Count
1211685 bp
Genome Length
4775122 bp
Protein-coding Genes
4377 genes
Non-Coding Genes
324 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| porin | FGC38_RS03290 | Not Available | Negative | 662421 - 663488 | 39268.1 |
| Putative holin | FGC38_RS03295 | Not Available | Positive | 664061 - 664276 | 7778.49 |
| Lysozyme | FGC38_RS03300 | Not Available | Positive | 664276 - 664773 | 17972.8 |
| Rz1 protein | FGC38_RS03305 | Not Available | Positive | 664990 - 665172 | 6690.59 |
| Putative lipoprotein bor | FGC38_RS03310 | Not Available | Negative | 665263 - 665556 | 10447.9 |
| Putative envelope protein | FGC38_RS03315 | Not Available | Negative | 665847 - 666257 | 16414.6 |
| Hypothetical protein | FGC38_RS03320 | Not Available | Positive | 666543 - 666749 | 7624.14 |
| Hypothetical protein | FGC38_RS03325 | Not Available | Negative | 666914 - 667108 | 7520.93 |
| Dna packaging protein | FGC38_RS03330 | Not Available | Positive | 667497 - 668042 | 20429.2 |
| Dna packaging protein | FGC38_RS23470 | Not Available | Positive | 668017 - 668325 | 12027.4 |
Pathways
12367 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





