Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | BE104 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1176476 bp
Thymine Count
1174817 bp
Guanine Count
1212144 bp
Cytosine Count
1211685 bp
Genome Length
4775122 bp
Protein-coding Genes
4377 genes
Non-Coding Genes
324 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| isoleucine--trna ligase | FGC38_RS00115 | Not Available | Positive | 22391 - 25207 | 104302.0 |
| signal peptidase ii | FGC38_RS00120 | Not Available | Positive | 25207 - 25701 | 18157.3 |
| fkbp-type peptidyl-prolyl cis-trans isomerase | FGC38_RS00125 | Not Available | Positive | 25826 - 26275 | 16081.9 |
| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase | FGC38_RS00130 | Not Available | Positive | 26277 - 27227 | 34776.6 |
| ribonucleoside hydrolase rihc | FGC38_RS00135 | Not Available | Positive | 27293 - 28207 | 32562.7 |
| 4-hydroxy-tetrahydrodipicolinate reductase | FGC38_RS00140 | Not Available | Positive | 28374 - 29195 | 28758.3 |
| glutamine-hydrolyzing carbamoyl-phosphate synthase small subunit | FGC38_RS00145 | Not Available | Positive | 29651 - 30799 | 41433.4 |
| carbamoyl-phosphate synthase large subunit | FGC38_RS00150 | Not Available | Positive | 30817 - 34038 | 117849.0 |
| carnitine metabolism transcriptional regulator caif | FGC38_RS00155 | Not Available | Positive | 34300 - 34695 | 15437.1 |
| carnitine operon protein caie | FGC38_RS00160 | Not Available | Negative | 34781 - 35371 | 21245.7 |
Pathways
12367 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





