Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | BE104 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1176476 bp
Thymine Count
1174817 bp
Guanine Count
1212144 bp
Cytosine Count
1211685 bp
Genome Length
4775122 bp
Protein-coding Genes
4377 genes
Non-Coding Genes
324 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| Putative transcriptional repressor dica | FGC38_RS08950 | Not Available | Positive | 1781898 - 1782305 | 15656.9 |
| Hypothetical protein | FGC38_RS08955 | Not Available | Positive | 1782472 - 1782627 | 5792.67 |
| protein ydfb | FGC38_RS23820 | Not Available | Positive | 1782629 - 1782757 | 4688.29 |
| protein ydfc | FGC38_RS08960 | Not Available | Positive | 1782787 - 1783005 | 8350.92 |
| cell division inhibition protein dicb | FGC38_RS08970 | Not Available | Positive | 1783573 - 1783761 | 6964.7 |
| lysis protein ydfd | FGC38_RS08975 | Not Available | Positive | 1783758 - 1783949 | 6842.35 |
| Putative exonuclease | FGC38_RS08980 | Not Available | Positive | 1784042 - 1784809 | 29247.7 |
| Is2 transposase tnpb | FGC38_RS08985 | Not Available | Positive | 1784806 - 1785501 | 26248.2 |
| Attr | Not Available | Not Available | Positive | 1785356 - 1785367 | Not Available |
| Putative integrase | FGC38_RS08990 | Not Available | Positive | 1785515 - 1786672 | 43663.5 |
Pathways
12367 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





