Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | BE104 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1176476 bp
Thymine Count
1174817 bp
Guanine Count
1212144 bp
Cytosine Count
1211685 bp
Genome Length
4775122 bp
Protein-coding Genes
4377 genes
Non-Coding Genes
324 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| Terminase large subunit | FGC38_RS06665 | Not Available | Positive | 1339566 - 1340702 | 42541.1 |
| Putative integral membrane protein | FGC38_RS06670 | Not Available | Positive | 1340714 - 1340896 | 6381.13 |
| Portal protein | FGC38_RS06675 | Not Available | Positive | 1340896 - 1341303 | 15023.2 |
| Baseplate protein | FGC38_RS06680 | Not Available | Positive | 1341302 - 1342087 | 27916.8 |
| Tail protein | FGC38_RS06685 | Not Available | Positive | 1342078 - 1342662 | 21644.6 |
| Tail protein | FGC38_RS06690 | Not Available | Positive | 1342666 - 1343294 | 22831.8 |
| Tail fiber assembly protein | FGC38_RS06695 | Not Available | Positive | 1343296 - 1343709 | 15435.2 |
| Tail fiber assembly protein | FGC38_RS06700 | Not Available | Negative | 1343681 - 1344283 | 21663.0 |
| Tail fiber protein | FGC38_RS06705 | Not Available | Negative | 1344283 - 1344819 | 19284.6 |
| Serine-type dna invertase fin | FGC38_RS06710 | Not Available | Positive | 1344849 - 1345403 | 20574.1 |
Pathways
12367 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





