Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | BE104 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1176476 bp
Thymine Count
1174817 bp
Guanine Count
1212144 bp
Cytosine Count
1211685 bp
Genome Length
4775122 bp
Protein-coding Genes
4377 genes
Non-Coding Genes
324 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| Attl | Not Available | Not Available | Positive | 651418 - 651464 | Not Available |
| Integrase | FGC38_RS03195 | Not Available | Negative | 651478 - 652641 | 45092.5 |
| Putative exonuclease | FGC38_RS03200 | Not Available | Negative | 652761 - 653039 | 11116.3 |
| Replication protein p | FGC38_RS03205 | Not Available | Positive | 653039 - 653350 | 11641.1 |
| Ren protein | FGC38_RS03210 | Not Available | Positive | 653347 - 653436 | 3120.76 |
| Is3 transposase b | FGC38_RS03215 | Not Available | Positive | 653505 - 654667 | 45023.8 |
| Ren protein | FGC38_RS03220 | Not Available | Positive | 654698 - 654910 | 8058.85 |
| Putative quaternary ammonium compound-resistance protein qace | FGC38_RS03225 | Not Available | Positive | 654978 - 655310 | 11959.1 |
| protein ylcj | FGC38_RS03230 | Not Available | Positive | 655358 - 655507 | 5943.81 |
| Gp53 | FGC38_RS03235 | Not Available | Positive | 655565 - 657091 | 57530.1 |
Pathways
12367 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Catheter-associated urinary tract infection | Causes | PMC2900259 |
| Cauti | Causes | PMC2900259 |
| Hemorrhagic colitis | Causes | PMC9731836 |
| Hemolytic and uremic syndrome (hus) | Causes | PMC9731836 |
| Infection in the urinary tract | Causes | PMC10160630 |
| Infection in other extraintestinal sites | Causes | PMC10160630 |
| Haemolytic uraemic syndrome | Causes | PMC11542628 |
| Hus | Causes | PMC11542628 |
| Sepsis | Causes | PMC12660362 |
| Bacteraemia | Causes | PMC12660362 |





