Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | BE104 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1176476 bp
Thymine Count
1174817 bp
Guanine Count
1212144 bp
Cytosine Count
1211685 bp
Genome Length
4775122 bp
Protein-coding Genes
4377 genes
Non-Coding Genes
324 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| ribosome silencing factor | FGC38_RS03730 | Not Available | Negative | 755382 - 755699 | 11582.9 |
| adenosylcobalamin/alpha-ribazole phosphatase | FGC38_RS03735 | Not Available | Negative | 755959 - 756570 | 23309.8 |
| nicotinate-nucleotide adenylyltransferase | FGC38_RS03740 | Not Available | Negative | 756594 - 757235 | 24529.3 |
| dna polymerase iii subunit delta | FGC38_RS03745 | Not Available | Negative | 757237 - 758268 | 38706.0 |
| lps assembly lipoprotein lpte | FGC38_RS03750 | Not Available | Negative | 758268 - 758849 | 21357.8 |
| leucine--trna ligase | FGC38_RS03755 | Not Available | Negative | 758864 - 761446 | 97239.0 |
| zinc ribbon-containing protein | FGC38_RS03760 | Not Available | Positive | 761681 - 762163 | 18798.2 |
| sel1 family tpr-like repeat protein ybeq | FGC38_RS03765 | Not Available | Negative | 762233 - 763210 | 37032.7 |
| duf1266 domain-containing protein | FGC38_RS03770 | Not Available | Positive | 763374 - 764081 | 27737.5 |
| j domain-containing protein | FGC38_RS03775 | Not Available | Positive | 764078 - 765505 | 55259.3 |
Pathways
12367 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





