Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | BE104 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1176476 bp
Thymine Count
1174817 bp
Guanine Count
1212144 bp
Cytosine Count
1211685 bp
Genome Length
4775122 bp
Protein-coding Genes
4377 genes
Non-Coding Genes
324 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| twin-arginine translocase subunit tate | FGC38_RS03680 | Not Available | Positive | 745610 - 745813 | 7024.71 |
| lipoyl synthase | FGC38_RS03685 | Not Available | Negative | 745914 - 746879 | 36073.8 |
| ybef family transcriptional regulator | FGC38_RS03690 | Not Available | Negative | 747088 - 748041 | 35962.5 |
| lipoyl(octanoyl) transferase lipb | FGC38_RS03695 | Not Available | Negative | 748300 - 748941 | 23884.0 |
| duf493 family protein ybed | FGC38_RS03700 | Not Available | Negative | 749042 - 749305 | 9827.92 |
| d-alanyl-d-alanine carboxypeptidase daca | FGC38_RS03705 | Not Available | Negative | 749415 - 750626 | 44446.5 |
| endolytic peptidoglycan transglycosylase rlpa | FGC38_RS03710 | Not Available | Negative | 750765 - 751853 | 37530.1 |
| peptidoglycan glycosyltransferase mrdb | FGC38_RS03715 | Not Available | Negative | 751864 - 752976 | 40478.6 |
| peptidoglycan dd-transpeptidase mrda | FGC38_RS03720 | Not Available | Negative | 752979 - 754880 | 70860.6 |
| 23s rrna (pseudouridine(1915)-n(3))-methyltransferase rlmh | FGC38_RS03725 | Not Available | Negative | 754911 - 755378 | 17342.1 |
Pathways
12367 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





