Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | BE104 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1176476 bp
Thymine Count
1174817 bp
Guanine Count
1212144 bp
Cytosine Count
1211685 bp
Genome Length
4775122 bp
Protein-coding Genes
4377 genes
Non-Coding Genes
324 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| citrate (pro-3s)-lyase subunit beta | FGC38_RS03630 | Not Available | Negative | 736245 - 737153 | 33111.6 |
| citrate lyase acyl carrier protein | FGC38_RS03635 | Not Available | Negative | 737150 - 737446 | 10689.9 |
| [citrate (pro-3s)-lyase] ligase | FGC38_RS03640 | Not Available | Negative | 737461 - 738519 | 40079.5 |
| sensor histidine kinase dpib | FGC38_RS03645 | Not Available | Positive | 738898 - 740556 | 61687.8 |
| two-component response regulator dpia | FGC38_RS03650 | Not Available | Positive | 740525 - 741205 | 25454.9 |
| anaerobic c4-dicarboxylate transporter dcuc | FGC38_RS03655 | Not Available | Negative | 741246 - 742631 | 48415.3 |
| lipid iv(a) palmitoyltransferase pagp | FGC38_RS03660 | Not Available | Positive | 743220 - 743780 | 21770.6 |
| transcription antiterminator/rna stability regulator cspe | FGC38_RS03665 | Not Available | Positive | 743955 - 744164 | 7463.84 |
| fluoride efflux transporter crcb | FGC38_RS03670 | Not Available | Negative | 744218 - 744601 | 13778.1 |
| hypothetical protein | FGC38_RS03675 | Not Available | Positive | 744694 - 745481 | 29537.2 |
Pathways
12367 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





