Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | BE104 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1176476 bp
Thymine Count
1174817 bp
Guanine Count
1212144 bp
Cytosine Count
1211685 bp
Genome Length
4775122 bp
Protein-coding Genes
4377 genes
Non-Coding Genes
324 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| alkyl hydroperoxide reductase subunit f | FGC38_RS03585 | Not Available | Positive | 726416 - 727981 | 56180.4 |
| universal stress protein uspg | FGC38_RS03590 | Not Available | Negative | 728102 - 728530 | 15936.1 |
| zinc-dependent alcohol dehydrogenase | FGC38_RS03595 | Not Available | Positive | 728751 - 729989 | 44178.1 |
| small membrane protein ylda | FGC38_RS23780 | Not Available | Negative | 729993 - 730082 | 3258.21 |
| nucleoside diphosphate kinase regulator | FGC38_RS03600 | Not Available | Negative | 730220 - 730630 | 14928.0 |
| ribonuclease i | FGC38_RS03605 | Not Available | Negative | 730860 - 731666 | 29619.1 |
| citrate/succinate antiporter citt | FGC38_RS03610 | Not Available | Negative | 731780 - 733243 | 53095.7 |
| triphosphoribosyl-dephospho-coa synthase citg | FGC38_RS03615 | Not Available | Negative | 733294 - 734172 | 31646.4 |
| citrate lyase holo-[acyl-carrier protein] synthase | FGC38_RS03620 | Not Available | Negative | 734147 - 734698 | 20271.5 |
| citrate lyase subunit alpha | FGC38_RS03625 | Not Available | Negative | 734702 - 736234 | 55176.0 |
Pathways
12367 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





