Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | BE104 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1176476 bp
Thymine Count
1174817 bp
Guanine Count
1212144 bp
Cytosine Count
1211685 bp
Genome Length
4775122 bp
Protein-coding Genes
4377 genes
Non-Coding Genes
324 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| cu(+)/ag(+) sensor histidine kinase cuss | FGC38_RS03385 | Not Available | Negative | 679991 - 681433 | 53741.2 |
| copper response regulator transcription factor cusr | FGC38_RS03390 | Not Available | Negative | 681423 - 682106 | 25396.1 |
| cu(+)/ag(+) efflux rnd transporter outer membrane channel cusc | FGC38_RS03395 | Not Available | Positive | 682263 - 683636 | 50272.4 |
| cu(+)/ag(+) efflux rnd transporter periplasmic metallochaperone cusf | FGC38_RS03400 | Not Available | Positive | 683794 - 684126 | 12251.9 |
| cu(+)/ag(+) efflux rnd transporter periplasmic adaptor subunit cusb | FGC38_RS03405 | Not Available | Positive | 684142 - 685365 | 44307.4 |
| cu(+)/ag(+) efflux rnd transporter permease subunit cusa | FGC38_RS03410 | Not Available | Positive | 685377 - 688520 | 114714.0 |
| phenylalanine transporter | FGC38_RS03415 | Not Available | Positive | 688622 - 689998 | 50680.4 |
| mechanosensitive ion channel ybdg | FGC38_RS03420 | Not Available | Negative | 690079 - 691326 | 46605.5 |
| oxygen-insensitive nad(p)h nitroreductase | FGC38_RS03425 | Not Available | Negative | 691434 - 692087 | 23906.4 |
| mmcq/yjbr family dna-binding protein | FGC38_RS03430 | Not Available | Negative | 692181 - 692549 | 14051.1 |
Pathways
12367 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





