Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | BE104 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1176476 bp
Thymine Count
1174817 bp
Guanine Count
1212144 bp
Cytosine Count
1211685 bp
Genome Length
4775122 bp
Protein-coding Genes
4377 genes
Non-Coding Genes
324 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| fimbrial biogenesis usher protein | FGC38_RS03170 | Not Available | Positive | 646360 - 648963 | 95682.3 |
| type 1 fimbria d-mannose specific adhesin fimh | FGC38_RS03175 | Not Available | Positive | 649005 - 649982 | 35495.4 |
| fimbria assembly protein | FGC38_RS03180 | Not Available | Positive | 649993 - 650508 | 18223.6 |
| fimbria biosynthesis transcriptional regulator fimz | FGC38_RS03185 | Not Available | Negative | 650511 - 651143 | 23664.9 |
| Trna-arg | Not Available | Not Available | Positive | 651386 - 651462 | Not Available |
| omptin family outer membrane protease ompt | FGC38_RS03360 | Not Available | Negative | 671343 - 672296 | 35564.1 |
| dna-binding transcriptional regulator envy | FGC38_RS03365 | Not Available | Negative | 672810 - 673571 | 29020.5 |
| duf4434 family protein | FGC38_RS03370 | Not Available | Negative | 673754 - 674644 | 33058.6 |
| bacteriophage adsorption protein nfra | FGC38_RS03375 | Not Available | Negative | 674645 - 677617 | 111314.0 |
| cyclic di-3',5'-guanylate-activated glycosyltransferase nrfb | FGC38_RS03380 | Not Available | Negative | 677604 - 679841 | 85324.3 |
Pathways
12367 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





