Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | BE104 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1176476 bp
Thymine Count
1174817 bp
Guanine Count
1212144 bp
Cytosine Count
1211685 bp
Genome Length
4775122 bp
Protein-coding Genes
4377 genes
Non-Coding Genes
324 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| 5-(carboxyamino)imidazole ribonucleotide synthase | FGC38_RS03120 | Not Available | Negative | 638190 - 639257 | 39463.4 |
| 5-(carboxyamino)imidazole ribonucleotide mutase | FGC38_RS03125 | Not Available | Negative | 639254 - 639763 | 17781.3 |
| udp-2,3-diacylglucosamine diphosphatase | FGC38_RS03130 | Not Available | Negative | 639881 - 640603 | 26895.7 |
| peptidylprolyl isomerase b | FGC38_RS03135 | Not Available | Negative | 640606 - 641100 | 18154.5 |
| cysteine--trna ligase | FGC38_RS03140 | Not Available | Positive | 641274 - 642659 | 52205.0 |
| metal-dependent hydrolase | FGC38_RS03145 | Not Available | Negative | 642695 - 643216 | 19531.6 |
| ribosome-associated protein ybcj | FGC38_RS03150 | Not Available | Negative | 643324 - 643536 | 7389.95 |
| bifunctional methylenetetrahydrofolate dehydrogenase/methenyltetrahydrofolate cyclohydrolase fold | FGC38_RS03155 | Not Available | Negative | 643538 - 644404 | 31045.6 |
| type 1 fimbrial major subunit fima | FGC38_RS03160 | Not Available | Positive | 644875 - 645417 | 18475.5 |
| type 1 fimbria chaperone fimc | FGC38_RS03165 | Not Available | Positive | 645637 - 646329 | 25459.1 |
Pathways
12367 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





