Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | BE104 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1176476 bp
Thymine Count
1174817 bp
Guanine Count
1212144 bp
Cytosine Count
1211685 bp
Genome Length
4775122 bp
Protein-coding Genes
4377 genes
Non-Coding Genes
324 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| allantoinase allb | FGC38_RS03070 | Not Available | Positive | 625810 - 627171 | 49604.4 |
| uracil/xanthine transporter | FGC38_RS03075 | Not Available | Positive | 627228 - 628529 | 47242.2 |
| glycerate 3-kinase | FGC38_RS03080 | Not Available | Positive | 628551 - 629696 | 38736.9 |
| (s)-ureidoglycine aminohydrolase | FGC38_RS03085 | Not Available | Negative | 629924 - 630709 | 28732.1 |
| allantoate deiminase | FGC38_RS03090 | Not Available | Negative | 630720 - 631955 | 45696.6 |
| ureidoglycolate dehydrogenase | FGC38_RS03095 | Not Available | Negative | 631977 - 633026 | 37969.3 |
| acyl-coa synthetase fdra | FGC38_RS03100 | Not Available | Positive | 633343 - 635010 | 58599.4 |
| duf1116 domain-containing protein | FGC38_RS03105 | Not Available | Positive | 635020 - 636279 | 44981.6 |
| duf2877 domain-containing protein | FGC38_RS03110 | Not Available | Positive | 636290 - 637105 | 29598.8 |
| carbamate kinase | FGC38_RS03115 | Not Available | Positive | 637102 - 637995 | 31646.0 |
Pathways
12367 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





