Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | BE104 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1176476 bp
Thymine Count
1174817 bp
Guanine Count
1212144 bp
Cytosine Count
1211685 bp
Genome Length
4775122 bp
Protein-coding Genes
4377 genes
Non-Coding Genes
324 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| trab/gumn family protein | FGC38_RS02925 | Not Available | Negative | 593949 - 594743 | 29904.3 |
| higa family addiction module antitoxin | FGC38_RS02935 | Not Available | Positive | 594881 - 595222 | 13171.8 |
| copper-exporting p-type atpase copa | FGC38_RS02940 | Not Available | Negative | 595538 - 598042 | 87878.4 |
| glutaminase a | FGC38_RS02945 | Not Available | Positive | 598304 - 599236 | 32905.2 |
| apc family permease | FGC38_RS02950 | Not Available | Positive | 599239 - 600531 | 45661.5 |
| hypothetical protein | FGC38_RS23655 | Not Available | Positive | 600562 - 600659 | 3637.51 |
| cu(i)-responsive transcriptional regulator | FGC38_RS02955 | Not Available | Positive | 600656 - 601063 | 15236.0 |
| nfed family protein | FGC38_RS02960 | Not Available | Negative | 601064 - 601522 | 16939.8 |
| spfh domain-containing protein | FGC38_RS02965 | Not Available | Negative | 601519 - 602436 | 33745.1 |
| iron efflux abc transporter atp-binding subunit feta | FGC38_RS02970 | Not Available | Positive | 602582 - 603259 | 25383.5 |
Pathways
12367 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





