Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | BE104 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1176476 bp
Thymine Count
1174817 bp
Guanine Count
1212144 bp
Cytosine Count
1211685 bp
Genome Length
4775122 bp
Protein-coding Genes
4377 genes
Non-Coding Genes
324 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| efflux rnd transporter permease acrb | FGC38_RS02820 | Not Available | Negative | 567917 - 571066 | 113580.0 |
| multidrug efflux rnd transporter periplasmic adaptor subunit acra | FGC38_RS02825 | Not Available | Negative | 571089 - 572282 | 42199.1 |
| multidrug efflux transporter transcriptional repressor acrr | FGC38_RS02830 | Not Available | Positive | 572424 - 573071 | 24768.1 |
| mechanosensitive channel msck | FGC38_RS02835 | Not Available | Positive | 573199 - 576561 | 127223.0 |
| pleiotropic regulatory protein rsms | FGC38_RS02840 | Not Available | Negative | 576773 - 576934 | 6025.2 |
| primosomal replication protein n'' | FGC38_RS02845 | Not Available | Negative | 576948 - 577475 | 20376.5 |
| duf454 family protein | FGC38_RS02850 | Not Available | Positive | 577545 - 577922 | 14771.0 |
| adenine phosphoribosyltransferase | FGC38_RS02855 | Not Available | Positive | 578075 - 578626 | 19860.1 |
| dna polymerase iii subunit gamma/tau | FGC38_RS02860 | Not Available | Positive | 578755 - 580686 | 71141.8 |
| ybab/ebfc family nucleoid-associated protein | FGC38_RS02865 | Not Available | Positive | 580739 - 581068 | 12015.6 |
Pathways
12367 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





