Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | BE104 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1176476 bp
Thymine Count
1174817 bp
Guanine Count
1212144 bp
Cytosine Count
1211685 bp
Genome Length
4775122 bp
Protein-coding Genes
4377 genes
Non-Coding Genes
324 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| is3-like element is3 family transposase | FGC38_RS02375 | Not Available | Negative | 478402 - 479564 | 45023.8 |
| hypothetical protein | FGC38_RS02380 | Not Available | Positive | 479636 - 481081 | 51726.1 |
| hydrogen peroxide resistance inhibitor ipra | FGC38_RS02385 | Not Available | Positive | 481169 - 481792 | 23957.1 |
| d-alanyl-d-alanine- carboxypeptidase/endopeptidase amph | FGC38_RS02390 | Not Available | Negative | 481793 - 482950 | 41851.5 |
| peptide antibiotic transporter sbma | FGC38_RS02395 | Not Available | Positive | 483302 - 484522 | 46461.9 |
| surface-exposed outer membrane lipoprotein yaiw | FGC38_RS02400 | Not Available | Positive | 484535 - 485629 | 40416.5 |
| yaiy family protein | FGC38_RS02405 | Not Available | Negative | 485688 - 485996 | 11425.2 |
| duf2754 domain-containing protein | FGC38_RS02410 | Not Available | Positive | 486256 - 486468 | 8097.92 |
| d-alanine--d-alanine ligase | FGC38_RS02415 | Not Available | Negative | 486492 - 487586 | 39318.0 |
| hypothetical protein | FGC38_RS23355 | Not Available | Positive | 487664 - 487867 | 8034.13 |
Pathways
12367 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





