Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | BE104 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1176476 bp
Thymine Count
1174817 bp
Guanine Count
1212144 bp
Cytosine Count
1211685 bp
Genome Length
4775122 bp
Protein-coding Genes
4377 genes
Non-Coding Genes
324 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| is3-like element is2 family transposase | FGC38_RS02320 | Not Available | Positive | 468014 - 469242 | 46430.7 |
| hypothetical protein | FGC38_RS02325 | Not Available | Negative | 469251 - 469514 | 9631.73 |
| glycosyltransferase | FGC38_RS02330 | Not Available | Negative | 469402 - 470598 | 44711.0 |
| hypothetical protein | FGC38_RS02340 | Not Available | Negative | 470608 - 471279 | 24881.0 |
| taurine abc transporter substrate-binding protein | FGC38_RS02345 | Not Available | Positive | 471895 - 472857 | 34267.9 |
| taurine abc transporter atp-binding subunit | FGC38_RS02350 | Not Available | Positive | 472870 - 473637 | 28298.5 |
| taurine abc transporter permease tauc | FGC38_RS02355 | Not Available | Positive | 473634 - 474461 | 29813.8 |
| taurine dioxygenase | FGC38_RS02360 | Not Available | Positive | 474458 - 475309 | 32411.2 |
| porphobilinogen synthase | FGC38_RS02365 | Not Available | Negative | 475416 - 476390 | 35626.8 |
| hypothetical protein | FGC38_RS02370 | Not Available | Positive | 476914 - 478440 | 55443.9 |
Pathways
12367 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





