Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | BE104 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1176476 bp
Thymine Count
1174817 bp
Guanine Count
1212144 bp
Cytosine Count
1211685 bp
Genome Length
4775122 bp
Protein-coding Genes
4377 genes
Non-Coding Genes
324 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| acetaldehyde dehydrogenase | FGC38_RS02275 | Not Available | Positive | 459585 - 460535 | 33444.5 |
| 4-hydroxy-2-oxovalerate aldolase | FGC38_RS02280 | Not Available | Positive | 460532 - 461545 | 36472.6 |
| hypothetical protein | FGC38_RS23775 | Not Available | Positive | 461790 - 461959 | 5648.82 |
| 3-(3-hydroxy-phenyl)propionate transporter | FGC38_RS02285 | Not Available | Positive | 462123 - 463334 | 41553.4 |
| duf2058 domain-containing protein | FGC38_RS02290 | Not Available | Positive | 463436 - 463975 | 19923.8 |
| s-formylglutathione hydrolase | FGC38_RS02295 | Not Available | Negative | 464199 - 465032 | 31426.2 |
| s-(hydroxymethyl)glutathione dehydrogenase | FGC38_RS02300 | Not Available | Negative | 465126 - 466235 | 39361.3 |
| formaldehyde-responsive transcriptional repressor frmr | FGC38_RS02305 | Not Available | Negative | 466270 - 466545 | 10318.3 |
| yaio family outer membrane beta-barrel protein | FGC38_RS02310 | Not Available | Negative | 466732 - 467505 | 29041.8 |
| transferase | FGC38_RS02315 | Not Available | Negative | 467507 - 467950 | 15683.8 |
Pathways
12367 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





