Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | BE104 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1176476 bp
Thymine Count
1174817 bp
Guanine Count
1212144 bp
Cytosine Count
1211685 bp
Genome Length
4775122 bp
Protein-coding Genes
4377 genes
Non-Coding Genes
324 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| conjugal transfer complement resistance protein trat | FGC38_RS01985 | Not Available | Positive | 391550 - 392281 | 25902.2 |
| type iv conjugative transfer system coupling protein trad | FGC38_RS01990 | Not Available | Positive | 392534 - 394687 | 81493.5 |
| type ii toxin-antitoxin system trna(fmet)-specific endonuclease vapc | FGC38_RS01995 | Not Available | Negative | 394696 - 395094 | 14801.0 |
| toxin-antitoxin system antitoxin vapb | FGC38_RS02000 | Not Available | Negative | 395094 - 395321 | 8513.01 |
| conjugative transfer relaxase/helicase trai | FGC38_RS02005 | Not Available | Positive | 395403 - 400673 | 192027.0 |
| conjugal transfer pilus acetylase trax | FGC38_RS02010 | Not Available | Positive | 400693 - 401439 | 27536.9 |
| hypothetical protein | FGC38_RS02015 | Not Available | Positive | 401494 - 401886 | 14875.3 |
| is3-like element is3 family transposase | FGC38_RS02020 | Not Available | Positive | 401955 - 403117 | 45023.8 |
| hypothetical protein | FGC38_RS02025 | Not Available | Negative | 403147 - 403800 | 25917.3 |
| hypothetical protein | FGC38_RS02030 | Not Available | Positive | 404103 - 404231 | 4697.56 |
Pathways
12367 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





