Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | BE104 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1176476 bp
Thymine Count
1174817 bp
Guanine Count
1212144 bp
Cytosine Count
1211685 bp
Genome Length
4775122 bp
Protein-coding Genes
4377 genes
Non-Coding Genes
324 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| type-f conjugative transfer system pilin assembly protein traf | FGC38_RS01935 | Not Available | Positive | 383828 - 384571 | 27974.6 |
| conjugal transfer protein trba | FGC38_RS01940 | Not Available | Positive | 384587 - 384934 | 12945.4 |
| protein arta | FGC38_RS01945 | Not Available | Negative | 384936 - 385250 | 12131.2 |
| type-f conjugative transfer system pilin chaperone traq | FGC38_RS01950 | Not Available | Positive | 385331 - 385615 | 10866.4 |
| type-f conjugative transfer system pilin assembly thiol-disulfide isomerase trbb | FGC38_RS01955 | Not Available | Positive | 385602 - 386147 | 19719.8 |
| p-type conjugative transfer protein trbj | FGC38_RS01960 | Not Available | Positive | 386077 - 386418 | 12587.5 |
| f-type conjugal transfer protein trbf | FGC38_RS01965 | Not Available | Positive | 386405 - 386785 | 14480.5 |
| conjugal transfer pilus assembly protein trah | FGC38_RS01970 | Not Available | Positive | 386785 - 388158 | 50116.0 |
| conjugal transfer mating-pair stabilization protein trag | FGC38_RS01975 | Not Available | Positive | 388155 - 390971 | 102477.0 |
| conjugal transfer entry exclusion protein tras | FGC38_RS01980 | Not Available | Positive | 391004 - 391525 | 19518.9 |
Pathways
12367 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





