Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | BE104 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1176476 bp
Thymine Count
1174817 bp
Guanine Count
1212144 bp
Cytosine Count
1211685 bp
Genome Length
4775122 bp
Protein-coding Genes
4377 genes
Non-Coding Genes
324 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| conjugal transfer protein trbg | FGC38_RS01885 | Not Available | Positive | 375192 - 375443 | 9126.86 |
| type iv conjugative transfer system lipoprotein trav | FGC38_RS01890 | Not Available | Positive | 375440 - 375955 | 18589.3 |
| conjugal transfer protein trar | FGC38_RS01895 | Not Available | Positive | 376090 - 376311 | 8313.95 |
| type iv secretion system protein trac | FGC38_RS01900 | Not Available | Positive | 376471 - 379098 | 99197.3 |
| type-f conjugative transfer system protein trbi | FGC38_RS01905 | Not Available | Positive | 379095 - 379481 | 14146.9 |
| type-f conjugative transfer system protein traw | FGC38_RS01910 | Not Available | Positive | 379478 - 380110 | 23631.7 |
| conjugal transfer pilus assembly protein trau | FGC38_RS01915 | Not Available | Positive | 380107 - 381099 | 36788.6 |
| type-f conjugative transfer system pilin assembly protein trbc | FGC38_RS01920 | Not Available | Positive | 381108 - 381746 | 23434.3 |
| type-f conjugative transfer system mating-pair stabilization protein tran | FGC38_RS01925 | Not Available | Positive | 381743 - 383551 | 65718.2 |
| conjugal transfer protein trbe | FGC38_RS01930 | Not Available | Positive | 383578 - 383835 | 9779.94 |
Pathways
12367 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





