Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | BE104 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1176476 bp
Thymine Count
1174817 bp
Guanine Count
1212144 bp
Cytosine Count
1211685 bp
Genome Length
4775122 bp
Protein-coding Genes
4377 genes
Non-Coding Genes
324 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| conjugal transfer relaxosome dna-binding protein tram | FGC38_RS01835 | Not Available | Positive | 369209 - 369592 | 14508.2 |
| conjugal transfer transcriptional regulator traj | FGC38_RS01840 | Not Available | Positive | 369779 - 370468 | 27063.2 |
| conjugal transfer relaxosome dna-bindin protein tray | FGC38_RS01845 | Not Available | Positive | 370567 - 370962 | 15184.2 |
| type iv conjugative transfer system pilin traa | FGC38_RS01850 | Not Available | Positive | 370995 - 371360 | 12769.3 |
| type iv conjugative transfer system protein tral | FGC38_RS01855 | Not Available | Positive | 371375 - 371686 | 11904.7 |
| type iv conjugative transfer system protein trae | FGC38_RS01860 | Not Available | Positive | 371708 - 372274 | 21225.5 |
| type-f conjugative transfer system secretin trak | FGC38_RS01865 | Not Available | Positive | 372261 - 372989 | 25628.6 |
| f-type conjugal transfer pilus assembly protein trab | FGC38_RS01870 | Not Available | Positive | 372989 - 374416 | 50462.8 |
| conjugal transfer pilus-stabilizing protein trap | FGC38_RS01875 | Not Available | Positive | 374406 - 374996 | 21962.6 |
| conjugal transfer protein trbd | FGC38_RS01880 | Not Available | Positive | 374983 - 375180 | 7053.61 |
Pathways
12367 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





