Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | BE104 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1176476 bp
Thymine Count
1174817 bp
Guanine Count
1212144 bp
Cytosine Count
1211685 bp
Genome Length
4775122 bp
Protein-coding Genes
4377 genes
Non-Coding Genes
324 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| transcriptional repressor pifc | FGC38_RS01665 | Not Available | Negative | 346067 - 347155 | 40655.1 |
| type ii toxin-antitoxin system antitoxin ccda | FGC38_RS01670 | Not Available | Positive | 347735 - 347953 | 8372.8 |
| type ii toxin-antitoxin system toxin ccdb | FGC38_RS01675 | Not Available | Positive | 347955 - 348260 | 11707.2 |
| site-specific integrase | FGC38_RS01680 | Not Available | Positive | 348261 - 349067 | 29602.2 |
| hypothetical protein | FGC38_RS23910 | Not Available | Positive | 349841 - 349915 | 2851.44 |
| is3-like element is2 family transposase | FGC38_RS01690 | Not Available | Negative | 349926 - 351154 | 46430.7 |
| replication initiation protein repe | FGC38_RS01695 | Not Available | Positive | 351228 - 351932 | 27328.8 |
| plasmid-partitioning protein sopa | FGC38_RS01700 | Not Available | Positive | 352520 - 353686 | 43662.6 |
| parb/repb/spo0j family plasmid partition protein | FGC38_RS01705 | Not Available | Positive | 353686 - 354657 | 35374.3 |
| hypothetical protein | FGC38_RS01720 | Not Available | Positive | 355610 - 356511 | 32924.9 |
Pathways
12367 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





