Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | BE104 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1176476 bp
Thymine Count
1174817 bp
Guanine Count
1212144 bp
Cytosine Count
1211685 bp
Genome Length
4775122 bp
Protein-coding Genes
4377 genes
Non-Coding Genes
324 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| fimbrial chaperone ecpe | FGC38_RS01500 | Not Available | Negative | 304496 - 305206 | 26629.7 |
| fimbrial adhesin ecpd | FGC38_RS01505 | Not Available | Negative | 305175 - 306818 | 60000.2 |
| fimbrial usher ecpc | FGC38_RS01510 | Not Available | Negative | 306808 - 309333 | 91233.7 |
| fimbrial chaperone ecpb | FGC38_RS01515 | Not Available | Negative | 309359 - 310027 | 24518.3 |
| common pilus major fimbrillin subunit ecpa | FGC38_RS01520 | Not Available | Negative | 310085 - 310672 | 20112.5 |
| ecp biosynthesis operon dna-binding transcriptional regulator ecpr | FGC38_RS01525 | Not Available | Negative | 310747 - 311289 | 21233.7 |
| protein ykgl | FGC38_RS01530 | Not Available | Positive | 312113 - 312340 | 8767.41 |
| type b 50s ribosomal protein l36 | FGC38_RS01535 | Not Available | Negative | 312375 - 312515 | 5466.94 |
| type b 50s ribosomal protein l31 | FGC38_RS01540 | Not Available | Negative | 312515 - 312778 | 9920.71 |
| small membrane protein ykgr | FGC38_RS23905 | Not Available | Negative | 313142 - 313243 | 3999.01 |
Pathways
12367 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





