Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | BE104 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1176476 bp
Thymine Count
1174817 bp
Guanine Count
1212144 bp
Cytosine Count
1211685 bp
Genome Length
4775122 bp
Protein-coding Genes
4377 genes
Non-Coding Genes
324 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| dna-binding transcriptional repressor xynr | FGC38_RS01405 | Not Available | Negative | 288405 - 289163 | 27839.6 |
| ornithine carbamoyltransferase | FGC38_RS01410 | Not Available | Negative | 289302 - 290306 | 36829.2 |
| putative translational regulatory protein argl | FGC38_RS23465 | Not Available | Negative | 290276 - 290371 | 3681.44 |
| hypothetical protein | FGC38_RS01415 | Not Available | Positive | 290430 - 290633 | 7926.37 |
| is1-like element is1b family transposase | FGC38_RS01420 | Not Available | Negative | 290650 - 291347 | 26573.3 |
| protein yagj | FGC38_RS01425 | Not Available | Positive | 291501 - 292232 | 27860.8 |
| inovirus gp2 family protein | FGC38_RS01430 | Not Available | Negative | 292323 - 292949 | 24472.2 |
| recombinase family protein | FGC38_RS01435 | Not Available | Negative | 293221 - 293919 | 27275.4 |
| protein yagm | FGC38_RS01440 | Not Available | Negative | 293946 - 294800 | 32680.4 |
| helix-turn-helix transcriptional regulator | FGC38_RS01445 | Not Available | Negative | 294919 - 295143 | 8638.46 |
Pathways
12367 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





