Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | BE104 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1176476 bp
Thymine Count
1174817 bp
Guanine Count
1212144 bp
Cytosine Count
1211685 bp
Genome Length
4775122 bp
Protein-coding Genes
4377 genes
Non-Coding Genes
324 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| is1-like element is1b family transposase | FGC38_RS01360 | Not Available | Negative | 279179 - 279876 | 26573.3 |
| hypothetical protein | FGC38_RS01365 | Not Available | Positive | 279932 - 280105 | 6615.0 |
| hypothetical protein | FGC38_RS01370 | Not Available | Negative | 280115 - 280363 | 9518.27 |
| type iv toxin-antitoxin system antitoxin yagb | FGC38_RS01375 | Not Available | Negative | 280386 - 280736 | 13184.8 |
| hypothetical protein | FGC38_RS23625 | Not Available | Negative | 280750 - 280815 | 2305.81 |
| is481-like element isec19 family transposase | FGC38_RS01380 | Not Available | Negative | 280830 - 281984 | 43771.1 |
| 2-keto-3-deoxygluconate aldolase | FGC38_RS01385 | Not Available | Positive | 282279 - 283187 | 32532.3 |
| xylonate dehydratase yagf | FGC38_RS01390 | Not Available | Positive | 283202 - 285169 | 69403.3 |
| mfs transporter | FGC38_RS01395 | Not Available | Positive | 285396 - 286778 | 50634.7 |
| glycoside hydrolase family 43 protein | FGC38_RS01400 | Not Available | Positive | 286790 - 288400 | 60828.1 |
Pathways
12367 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





