Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | BE104 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1176476 bp
Thymine Count
1174817 bp
Guanine Count
1212144 bp
Cytosine Count
1211685 bp
Genome Length
4775122 bp
Protein-coding Genes
4377 genes
Non-Coding Genes
324 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| dna-binding transcriptional regulator idnr | FGC38_RS22600 | Not Available | Negative | 4623612 - 4624610 | 37569.5 |
| gnt-ii system l-idonate transporter | FGC38_RS22605 | Not Available | Negative | 4624677 - 4625996 | 46044.2 |
| gluconate 5-dehydrogenase | FGC38_RS22610 | Not Available | Negative | 4626058 - 4626822 | 27564.3 |
| l-idonate 5-dehydrogenase | FGC38_RS22615 | Not Available | Negative | 4626846 - 4627877 | 37148.7 |
| gluconokinase | FGC38_RS22620 | Not Available | Positive | 4628094 - 4628657 | 21005.2 |
| nadph-dependent aldehyde reductase ahr | FGC38_RS22625 | Not Available | Negative | 4628661 - 4629680 | 36503.9 |
| Trna-leu | Not Available | Not Available | Positive | 4629876 - 4629960 | Not Available |
| tyrosine-type recombinase/integrase | FGC38_RS22640 | Not Available | Positive | 4630203 - 4631411 | 46103.6 |
| is3-like element is2 family transposase | FGC38_RS22645 | Not Available | Positive | 4631743 - 4632971 | 46430.7 |
| hypothetical protein | FGC38_RS22650 | Not Available | Negative | 4633064 - 4634244 | 44290.4 |
Pathways
12367 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





