Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | BE104 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1176476 bp
Thymine Count
1174817 bp
Guanine Count
1212144 bp
Cytosine Count
1211685 bp
Genome Length
4775122 bp
Protein-coding Genes
4377 genes
Non-Coding Genes
324 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| 2-iminobutanoate/2-iminopropanoate deaminase | FGC38_RS22505 | Not Available | Negative | 4603998 - 4604384 | 13612.3 |
| aspartate carbamoyltransferase regulatory subunit | FGC38_RS22510 | Not Available | Negative | 4604457 - 4604918 | 17121.6 |
| aspartate carbamoyltransferase | FGC38_RS22515 | Not Available | Negative | 4604931 - 4605866 | 34429.3 |
| pyr operon leader peptide | FGC38_RS22520 | Not Available | Negative | 4605870 - 4606004 | 5098.43 |
| rida family protein | FGC38_RS22525 | Not Available | Negative | 4606285 - 4606680 | 14591.0 |
| sdr family oxidoreductase | FGC38_RS22530 | Not Available | Negative | 4606811 - 4607524 | 24599.7 |
| tetr/acrr family transcriptional regulator | FGC38_RS22535 | Not Available | Positive | 4607595 - 4608188 | 21502.7 |
| toxin-antitoxin biofilm protein taba | FGC38_RS22540 | Not Available | Positive | 4608333 - 4608785 | 16866.3 |
| protein yjgl | FGC38_RS22545 | Not Available | Positive | 4608908 - 4610722 | 69581.6 |
| ornithine carbamoyltransferase | FGC38_RS22550 | Not Available | Negative | 4610778 - 4611782 | 36909.2 |
Pathways
12367 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





