Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | BE104 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1176476 bp
Thymine Count
1174817 bp
Guanine Count
1212144 bp
Cytosine Count
1211685 bp
Genome Length
4775122 bp
Protein-coding Genes
4377 genes
Non-Coding Genes
324 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| cell division protein ytfb | FGC38_RS22305 | Not Available | Negative | 4559484 - 4560122 | 23506.9 |
| fkbp-type peptidyl-prolyl cis-trans isomerase | FGC38_RS22310 | Not Available | Positive | 4560340 - 4560960 | 22217.5 |
| d-serine/d-alanine/glycine transporter | FGC38_RS22315 | Not Available | Positive | 4561269 - 4562681 | 51662.6 |
| iron-sulfur cluster repair protein ytfe | FGC38_RS22320 | Not Available | Negative | 4562726 - 4563388 | 24884.1 |
| dmt family transporter | FGC38_RS22325 | Not Available | Negative | 4563496 - 4564461 | 35210.6 |
| nad(p)h:quinone oxidoreductase | FGC38_RS22330 | Not Available | Negative | 4564569 - 4565429 | 29735.2 |
| winged helix-turn-helix transcriptional regulator | FGC38_RS22335 | Not Available | Positive | 4565518 - 4565898 | 14076.0 |
| 2',3'-cyclic-nucleotide 2'-phosphodiesterase | FGC38_RS22340 | Not Available | Negative | 4566027 - 4567970 | 70835.9 |
| 3'(2'),5'-bisphosphate nucleotidase cysq | FGC38_RS22345 | Not Available | Positive | 4568160 - 4568900 | 27177.3 |
| hypothetical protein | FGC38_RS22350 | Not Available | Positive | 4569112 - 4570050 | 35808.7 |
Pathways
12367 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





