Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | BE104 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1176476 bp
Thymine Count
1174817 bp
Guanine Count
1212144 bp
Cytosine Count
1211685 bp
Genome Length
4775122 bp
Protein-coding Genes
4377 genes
Non-Coding Genes
324 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| yaep family protein | FGC38_RS00950 | Not Available | Negative | 214702 - 214902 | 7214.59 |
| yaeq family protein | FGC38_RS00955 | Not Available | Positive | 215068 - 215613 | 20877.7 |
| alternative ribosome rescue aminoacyl-trna hydrolase arfb | FGC38_RS00960 | Not Available | Positive | 215610 - 216032 | 15624.0 |
| envelope stress response activation lipoprotein nlpe | FGC38_RS00965 | Not Available | Positive | 216046 - 216756 | 25845.7 |
| yaef family permuted papain-like enzyme | FGC38_RS00970 | Not Available | Negative | 216956 - 217780 | 29913.9 |
| proline--trna ligase | FGC38_RS00975 | Not Available | Negative | 217834 - 219552 | 63696.3 |
| trna (n6-threonylcarbamoyladenosine(37)-n6)-methyltransferase trmo | FGC38_RS00980 | Not Available | Negative | 219664 - 220371 | 26363.8 |
| rcs stress response system protein rcsf | FGC38_RS00985 | Not Available | Negative | 220368 - 220772 | 14164.3 |
| methionine abc transporter substrate-binding lipoprotein metq | FGC38_RS00990 | Not Available | Negative | 220890 - 221705 | 29433.3 |
| methionine abc transporter permease meti | FGC38_RS00995 | Not Available | Negative | 221745 - 222398 | 23257.6 |
Pathways
12367 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





