Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | BE104 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1176476 bp
Thymine Count
1174817 bp
Guanine Count
1212144 bp
Cytosine Count
1211685 bp
Genome Length
4775122 bp
Protein-coding Genes
4377 genes
Non-Coding Genes
324 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| melibiose:sodium transporter melb | FGC38_RS21855 | Not Available | Positive | 4474774 - 4476195 | 52639.5 |
| duf2238 domain-containing protein | FGC38_RS21860 | Not Available | Negative | 4476334 - 4476963 | 23443.4 |
| class i fumarate hydratase | FGC38_RS21865 | Not Available | Negative | 4477085 - 4478731 | 60108.7 |
| anaerobic c4-dicarboxylate transporter dcub | FGC38_RS21870 | Not Available | Negative | 4478809 - 4480149 | 47938.2 |
| two-component system response regulator dcur | FGC38_RS21875 | Not Available | Negative | 4480720 - 4481439 | 27489.9 |
| sensor histidine kinase | FGC38_RS21880 | Not Available | Negative | 4481436 - 4483067 | 60554.4 |
| 4fe-4s mono-cluster protein yjdi | FGC38_RS21885 | Not Available | Positive | 4483248 - 4483478 | 8550.35 |
| gnat family n-acetyltransferase | FGC38_RS21890 | Not Available | Positive | 4483490 - 4483762 | 10468.7 |
| type v toxin-antitoxin system endoribonuclease antitoxin ghos | FGC38_RS21895 | Not Available | Positive | 4483989 - 4484285 | 11468.6 |
| type v toxin-antitoxin system toxin ghot | FGC38_RS21900 | Not Available | Positive | 4484313 - 4484486 | 6555.44 |
Pathways
12367 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





