Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | BE104 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1176476 bp
Thymine Count
1174817 bp
Guanine Count
1212144 bp
Cytosine Count
1211685 bp
Genome Length
4775122 bp
Protein-coding Genes
4377 genes
Non-Coding Genes
324 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| phosphonate c-p lyase system protein phnh | FGC38_RS21755 | Not Available | Negative | 4452068 - 4452652 | 21028.6 |
| phosphonate c-p lyase system protein phng | FGC38_RS21760 | Not Available | Negative | 4452649 - 4453101 | 16540.6 |
| phosphonate metabolism transcriptional regulator phnf | FGC38_RS21765 | Not Available | Negative | 4453102 - 4453827 | 27623.1 |
| hypothetical protein | FGC38_RS21770 | Not Available | Negative | 4453848 - 4454635 | 28141.2 |
| phosphonate abc transporter substrate-binding protein | FGC38_RS21775 | Not Available | Negative | 4454741 - 4455757 | 37372.6 |
| phosphonate abc transporter atp-binding protein | FGC38_RS21780 | Not Available | Negative | 4455782 - 4456570 | 29432.4 |
| voc family metalloprotein yjdn | FGC38_RS21785 | Not Available | Negative | 4456703 - 4457146 | 16172.2 |
| zinc ribbon domain-containing protein yjdm | FGC38_RS21790 | Not Available | Negative | 4457804 - 4458139 | 12345.7 |
| clamp-binding protein crfc | FGC38_RS21795 | Not Available | Positive | 4458540 - 4460768 | 84375.9 |
| yjcz-like family protein | FGC38_RS21800 | Not Available | Positive | 4460765 - 4461643 | 32900.6 |
Pathways
12367 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





