Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | BE104 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1176476 bp
Thymine Count
1174817 bp
Guanine Count
1212144 bp
Cytosine Count
1211685 bp
Genome Length
4775122 bp
Protein-coding Genes
4377 genes
Non-Coding Genes
324 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| bifunctional allose-6-phosphate isomerase/ribose-5-phosphate isomerase rpib | FGC38_RS21705 | Not Available | Positive | 4444755 - 4445204 | 16074.3 |
| ddrrrql repeat protein yjdp | FGC38_RS21710 | Not Available | Positive | 4445273 - 4445602 | 13469.4 |
| phosphonate metabolism protein phnp | FGC38_RS21715 | Not Available | Negative | 4445749 - 4446507 | 27849.3 |
| aminoalkylphosphonate n-acetyltransferase | FGC38_RS21720 | Not Available | Negative | 4446509 - 4446943 | 16570.8 |
| ribose 1,5-bisphosphokinase | FGC38_RS21725 | Not Available | Negative | 4446930 - 4447487 | 20730.8 |
| alpha-d-ribose 1-methylphosphonate 5-triphosphate diphosphatase | FGC38_RS21730 | Not Available | Negative | 4447487 - 4448623 | 42012.9 |
| phosphonate c-p lyase system protein phnl | FGC38_RS21735 | Not Available | Negative | 4448620 - 4449300 | 24706.9 |
| phosphonate c-p lyase system protein phnk | FGC38_RS21740 | Not Available | Negative | 4449411 - 4450169 | 27832.6 |
| alpha-d-ribose 1-methylphosphonate 5-phosphate c-p-lyase phnj | FGC38_RS21745 | Not Available | Negative | 4450166 - 4451011 | 31846.9 |
| alpha-d-ribose 1-methylphosphonate 5-triphosphate synthase subunit phni | FGC38_RS21750 | Not Available | Negative | 4451004 - 4452068 | 38855.0 |
Pathways
12367 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





