Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | BE104 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1176476 bp
Thymine Count
1174817 bp
Guanine Count
1212144 bp
Cytosine Count
1211685 bp
Genome Length
4775122 bp
Protein-coding Genes
4377 genes
Non-Coding Genes
324 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| c-di-gmp phosphodiesterase pdec | FGC38_RS21555 | Not Available | Positive | 4406987 - 4408573 | 60804.7 |
| superoxide response transcriptional regulator soxs | FGC38_RS21560 | Not Available | Negative | 4408576 - 4408899 | 12911.6 |
| redox-sensitive transcriptional activator soxr | FGC38_RS21565 | Not Available | Positive | 4408985 - 4409449 | 17150.7 |
| guanine/hypoxanthine transporter ghxp | FGC38_RS21570 | Not Available | Positive | 4409995 - 4411344 | 45714.4 |
| na+/h+ antiporter | FGC38_RS21575 | Not Available | Positive | 4411496 - 4413145 | 60526.5 |
| t3ss effector pentapeptide repeat protein espx5 | FGC38_RS21580 | Not Available | Negative | 4413299 - 4414591 | 49381.1 |
| cation/acetate symporter actp | FGC38_RS21585 | Not Available | Negative | 4414769 - 4416418 | 59200.7 |
| duf485 domain-containing protein | FGC38_RS21590 | Not Available | Negative | 4416415 - 4416729 | 11672.3 |
| acetate--coa ligase | FGC38_RS21595 | Not Available | Negative | 4416929 - 4418887 | 72097.5 |
| ammonia-forming nitrite reductase cytochrome c552 subunit | FGC38_RS21600 | Not Available | Positive | 4419280 - 4420716 | 53705.7 |
Pathways
12367 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





