Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | BE104 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1176476 bp
Thymine Count
1174817 bp
Guanine Count
1212144 bp
Cytosine Count
1211685 bp
Genome Length
4775122 bp
Protein-coding Genes
4377 genes
Non-Coding Genes
324 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| diacylglycerol kinase | FGC38_RS21455 | Not Available | Positive | 4388153 - 4388521 | 13245.4 |
| transcriptional repressor lexa | FGC38_RS21460 | Not Available | Positive | 4388631 - 4389239 | 22359.1 |
| mate family efflux transporter dinf | FGC38_RS21465 | Not Available | Positive | 4389312 - 4390637 | 47728.0 |
| csbd family protein | FGC38_RS21470 | Not Available | Positive | 4390753 - 4390962 | 8325.67 |
| zinc uptake transcriptional repressor zur | FGC38_RS21475 | Not Available | Negative | 4391004 - 4391519 | 19255.2 |
| protein yjbl | FGC38_RS23895 | Not Available | Positive | 4391837 - 4392091 | 9749.9 |
| duf2713 domain-containing protein | FGC38_RS21485 | Not Available | Positive | 4392115 - 4392822 | 26674.2 |
| trna dihydrouridine(20/20a) synthase dusa | FGC38_RS21490 | Not Available | Positive | 4393185 - 4394222 | 38470.1 |
| envelope stress response protein pspg | FGC38_RS21495 | Not Available | Positive | 4394356 - 4394598 | 9024.0 |
| quinone oxidoreductase | FGC38_RS21500 | Not Available | Negative | 4394764 - 4395747 | 35174.2 |
Pathways
12367 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





