Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | BE104 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1176476 bp
Thymine Count
1174817 bp
Guanine Count
1212144 bp
Cytosine Count
1211685 bp
Genome Length
4775122 bp
Protein-coding Genes
4377 genes
Non-Coding Genes
324 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| malate synthase a | FGC38_RS21310 | Not Available | Positive | 4346994 - 4348595 | 60276.9 |
| isocitrate lyase | FGC38_RS21315 | Not Available | Positive | 4348625 - 4349929 | 47524.1 |
| bifunctional isocitrate dehydrogenase kinase/phosphatase | FGC38_RS21320 | Not Available | Positive | 4350112 - 4351848 | 67702.4 |
| type iii secretion system effector espl4 | FGC38_RS21325 | Not Available | Negative | 4351817 - 4354003 | 82602.9 |
| glyoxylate bypass operon transcriptional repressor iclr | FGC38_RS21330 | Not Available | Negative | 4354320 - 4355144 | 29741.1 |
| methionine synthase | FGC38_RS21335 | Not Available | Positive | 4355344 - 4359027 | 136005.0 |
| na/pi cotransporter family protein | FGC38_RS21340 | Not Available | Positive | 4359247 - 4360878 | 59470.7 |
| dipeptidase pepe | FGC38_RS21345 | Not Available | Negative | 4360969 - 4361658 | 24571.7 |
| 23s rrna pseudouridine(2604) synthase rluf | FGC38_RS21350 | Not Available | Positive | 4361870 - 4362742 | 32478.5 |
| duf3811 domain-containing protein | FGC38_RS21355 | Not Available | Negative | 4362875 - 4363147 | 10532.7 |
Pathways
12367 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





