Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | BE104 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1176476 bp
Thymine Count
1174817 bp
Guanine Count
1212144 bp
Cytosine Count
1211685 bp
Genome Length
4775122 bp
Protein-coding Genes
4377 genes
Non-Coding Genes
324 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| translation elongation factor ts | FGC38_RS00850 | Not Available | Positive | 191634 - 192485 | 30424.7 |
| ump kinase | FGC38_RS00855 | Not Available | Positive | 192632 - 193357 | 25971.9 |
| ribosome recycling factor | FGC38_RS00860 | Not Available | Positive | 193649 - 194206 | 20639.7 |
| 1-deoxy-d-xylulose-5-phosphate reductoisomerase | FGC38_RS00865 | Not Available | Positive | 194298 - 195494 | 43390.5 |
| (2e,6e)-farnesyl-diphosphate-specific ditrans,polycis-undecaprenyl-diphosphate synthase | FGC38_RS00870 | Not Available | Positive | 195683 - 196441 | 28314.5 |
| phosphatidate cytidylyltransferase | FGC38_RS00875 | Not Available | Positive | 196454 - 197311 | 31455.6 |
| sigma e protease regulator rsep | FGC38_RS00880 | Not Available | Positive | 197323 - 198675 | 49074.2 |
| outer membrane protein assembly factor bama | FGC38_RS00885 | Not Available | Positive | 198705 - 201137 | 90557.5 |
| molecular chaperone skp | FGC38_RS00890 | Not Available | Positive | 201259 - 201744 | 17689.2 |
| udp-3-o-(3-hydroxymyristoyl)glucosamine n-acyltransferase | FGC38_RS00895 | Not Available | Positive | 201748 - 202773 | 36040.7 |
Pathways
12367 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





