Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | BE104 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1176476 bp
Thymine Count
1174817 bp
Guanine Count
1212144 bp
Cytosine Count
1211685 bp
Genome Length
4775122 bp
Protein-coding Genes
4377 genes
Non-Coding Genes
324 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| sigma-54-dependent response regulator transcription factor zrar | FGC38_RS21260 | Not Available | Positive | 4334836 - 4336161 | 48397.4 |
| phosphoribosylamine--glycine ligase | FGC38_RS21265 | Not Available | Negative | 4336158 - 4337447 | 45943.0 |
| bifunctional phosphoribosylaminoimidazolecarboxamide formyltransferase/imp cyclohydrolase | FGC38_RS21270 | Not Available | Negative | 4337459 - 4339048 | 57332.4 |
| 16s ribosomal rna | Not Available | Not Available | Positive | 4339663 - 4341204 | Not Available |
| Trna-glu | Not Available | Not Available | Positive | 4341290 - 4341365 | Not Available |
| 23s ribosomal rna | Not Available | Not Available | Positive | 4341559 - 4344462 | Not Available |
| 5s ribosomal rna | Not Available | Not Available | Positive | 4344558 - 4344673 | Not Available |
| yjaa family stress response protein | FGC38_RS21295 | Not Available | Positive | 4344750 - 4345133 | 14447.7 |
| acetyltransferase | FGC38_RS21300 | Not Available | Negative | 4345196 - 4345639 | 16447.6 |
| homoserine o-acetyltransferase meta | FGC38_RS21305 | Not Available | Positive | 4345796 - 4346725 | 35729.2 |
Pathways
12367 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





