Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | BE104 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1176476 bp
Thymine Count
1174817 bp
Guanine Count
1212144 bp
Cytosine Count
1211685 bp
Genome Length
4775122 bp
Protein-coding Genes
4377 genes
Non-Coding Genes
324 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| phosphomethylpyrimidine synthase thic | FGC38_RS21210 | Not Available | Negative | 4325720 - 4327615 | 70854.4 |
| sigma d regulator | FGC38_RS21215 | Not Available | Negative | 4327848 - 4328324 | 18243.9 |
| nad(+) diphosphatase | FGC38_RS21220 | Not Available | Positive | 4328419 - 4329192 | 29690.6 |
| uroporphyrinogen decarboxylase | FGC38_RS21225 | Not Available | Positive | 4329232 - 4330296 | 39250.4 |
| deoxyribonuclease v | FGC38_RS21230 | Not Available | Positive | 4330306 - 4330977 | 24673.9 |
| yjag family protein | FGC38_RS21235 | Not Available | Positive | 4331020 - 4331610 | 22613.9 |
| nucleoid-associated protein hu-alpha | FGC38_RS21240 | Not Available | Positive | 4331797 - 4332069 | 9535.51 |
| duf1481 domain-containing protein | FGC38_RS21245 | Not Available | Positive | 4332082 - 4332777 | 26318.9 |
| zinc resistance sensor/chaperone zrap | FGC38_RS21250 | Not Available | Negative | 4332779 - 4333204 | 15200.3 |
| two-component system sensor histidine kinase zras | FGC38_RS21255 | Not Available | Positive | 4333442 - 4334839 | 51034.9 |
Pathways
12367 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





