Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | BE104 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1176476 bp
Thymine Count
1174817 bp
Guanine Count
1212144 bp
Cytosine Count
1211685 bp
Genome Length
4775122 bp
Protein-coding Genes
4377 genes
Non-Coding Genes
324 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | FGC38_RS20910 | Not Available | Negative | 4255120 - 4256029 | 32827.4 |
| primosomal protein n' | FGC38_RS20915 | Not Available | Negative | 4256218 - 4258416 | 81659.6 |
| 50s ribosomal protein l31 | FGC38_RS20920 | Not Available | Positive | 4258619 - 4258831 | 7871.49 |
| yiix family permuted papain-like enzyme | FGC38_RS20925 | Not Available | Negative | 4258892 - 4259500 | 23140.9 |
| met regulon transcriptional regulator metj | FGC38_RS20930 | Not Available | Negative | 4259684 - 4260001 | 12141.4 |
| hypothetical protein | FGC38_RS20935 | Not Available | Positive | 4260278 - 4261436 | 41045.8 |
| bifunctional aspartate kinase/homoserine dehydrogenase ii | FGC38_RS20940 | Not Available | Positive | 4261439 - 4263871 | 88892.8 |
| hypothetical protein | FGC38_RS23890 | Not Available | Negative | 4264010 - 4264144 | 5078.36 |
| methylenetetrahydrofolate reductase | FGC38_RS20945 | Not Available | Positive | 4264220 - 4265110 | 33104.5 |
| catalase/peroxidase hpi | FGC38_RS20950 | Not Available | Positive | 4265439 - 4267619 | 80028.0 |
Pathways
12367 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





