Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | BE104 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1176476 bp
Thymine Count
1174817 bp
Guanine Count
1212144 bp
Cytosine Count
1211685 bp
Genome Length
4775122 bp
Protein-coding Genes
4377 genes
Non-Coding Genes
324 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| peptidylprolyl isomerase ppic | FGC38_RS20120 | Not Available | Negative | 4091147 - 4091428 | 10232.6 |
| hypothetical protein | FGC38_RS20125 | Not Available | Negative | 4091627 - 4092075 | 16302.7 |
| dna helicase rep | FGC38_RS20130 | Not Available | Positive | 4092292 - 4094313 | 77028.7 |
| guanosine-5'-triphosphate,3'-diphosphate diphosphatase | FGC38_RS20135 | Not Available | Negative | 4094360 - 4095844 | 54874.4 |
| atp-dependent rna helicase rhlb | FGC38_RS20140 | Not Available | Negative | 4095980 - 4097245 | 47128.7 |
| thioredoxin trxa | FGC38_RS20145 | Not Available | Positive | 4097376 - 4097705 | 11807.2 |
| rho operon leader peptide rhol | FGC38_RS20150 | Not Available | Positive | 4097846 - 4097947 | 3750.4 |
| transcription termination factor rho | FGC38_RS20155 | Not Available | Positive | 4098032 - 4099291 | 47007.1 |
| udp-n-acetylglucosamine--undecaprenyl-phosphate n-acetylglucosaminephosphotransferase | FGC38_RS20160 | Not Available | Positive | 4099531 - 4100634 | 40959.7 |
| eca polysaccharide chain length modulation protein | FGC38_RS20165 | Not Available | Positive | 4100646 - 4101692 | 39491.3 |
Pathways
12367 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





