Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | BE104 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1176476 bp
Thymine Count
1174817 bp
Guanine Count
1212144 bp
Cytosine Count
1211685 bp
Genome Length
4775122 bp
Protein-coding Genes
4377 genes
Non-Coding Genes
324 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| aspartate--ammonia ligase | FGC38_RS19970 | Not Available | Positive | 4058770 - 4059762 | 36652.6 |
| atpase rava stimulator viaa | FGC38_RS19975 | Not Available | Negative | 4059767 - 4061218 | 55910.6 |
| atpase rava | FGC38_RS19980 | Not Available | Negative | 4061212 - 4062708 | 56392.1 |
| low affinity potassium transporter kup | FGC38_RS19985 | Not Available | Positive | 4062931 - 4064799 | 69298.3 |
| d-ribose pyranase | FGC38_RS19990 | Not Available | Positive | 4064966 - 4065385 | 15293.4 |
| ribose abc transporter atp-binding protein rbsa | FGC38_RS19995 | Not Available | Positive | 4065393 - 4066898 | 55045.0 |
| ribose abc transporter permease | FGC38_RS20000 | Not Available | Positive | 4066903 - 4067868 | 33454.0 |
| ribose abc transporter substrate-binding protein rbsb | FGC38_RS20005 | Not Available | Positive | 4067893 - 4068783 | 30952.3 |
| ribokinase | FGC38_RS20010 | Not Available | Positive | 4068909 - 4069838 | 32292.4 |
| ribose operon transcriptional repressor rbsr | FGC38_RS20015 | Not Available | Positive | 4069842 - 4070834 | 36614.1 |
Pathways
12367 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





