Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | BE104 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1176476 bp
Thymine Count
1174817 bp
Guanine Count
1212144 bp
Cytosine Count
1211685 bp
Genome Length
4775122 bp
Protein-coding Genes
4377 genes
Non-Coding Genes
324 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| trna uridine-5-carboxymethylaminomethyl(34) synthesis gtpase mnme | FGC38_RS19770 | Not Available | Positive | 4017666 - 4019030 | 49233.8 |
| tryptophanase leader peptide | FGC38_RS19775 | Not Available | Positive | 4019273 - 4019347 | 2894.56 |
| tryptophanase | FGC38_RS19780 | Not Available | Positive | 4019568 - 4020983 | 52776.4 |
| low affinity tryptophan permease tnab | FGC38_RS19785 | Not Available | Positive | 4021074 - 4022321 | 45213.2 |
| multidrug efflux mfs transporter mdtl | FGC38_RS19790 | Not Available | Positive | 4022453 - 4023628 | 41492.2 |
| hth-type transcriptional regulator yidz | FGC38_RS19795 | Not Available | Positive | 4023603 - 4024562 | 36883.9 |
| 4'-phosphopantetheinyl transferase family protein | FGC38_RS19800 | Not Available | Positive | 4024719 - 4025468 | 27648.2 |
| class i chromate reductase yief | FGC38_RS19805 | Not Available | Positive | 4025490 - 4026056 | 20376.8 |
| adenine permease adep | FGC38_RS19810 | Not Available | Negative | 4026110 - 4027447 | 46868.8 |
| 6-phosphogluconate phosphatase | FGC38_RS19815 | Not Available | Positive | 4027612 - 4028277 | 24665.7 |
Pathways
12367 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





