Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | BE104 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1176476 bp
Thymine Count
1174817 bp
Guanine Count
1212144 bp
Cytosine Count
1211685 bp
Genome Length
4775122 bp
Protein-coding Genes
4377 genes
Non-Coding Genes
324 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| transcriptional regulator uhpa | FGC38_RS19575 | Not Available | Negative | 3980974 - 3981564 | 20890.6 |
| acetolactate synthase small subunit | FGC38_RS19580 | Not Available | Negative | 3981640 - 3981930 | 11106.4 |
| acetolactate synthase large subunit | FGC38_RS19585 | Not Available | Negative | 3981934 - 3983622 | 60444.2 |
| ilvb operon leader peptide ivbl | FGC38_RS19590 | Not Available | Negative | 3983728 - 3983826 | 3206.11 |
| type i toxin-antitoxin system toxin tisb | FGC38_RS19595 | Not Available | Positive | 3984391 - 3984480 | 3222.32 |
| protein ysde | FGC38_RS23600 | Not Available | Negative | 3984604 - 3984678 | 2827.45 |
| multidrug efflux mfs transporter emrd | FGC38_RS19600 | Not Available | Positive | 3984760 - 3985944 | 42218.5 |
| radical sam protein | FGC38_RS19605 | Not Available | Negative | 3985952 - 3986449 | 19188.9 |
| duf202 domain-containing protein | FGC38_RS19610 | Not Available | Negative | 3986446 - 3986808 | 13769.1 |
| yidh family protein | FGC38_RS19615 | Not Available | Negative | 3986798 - 3987145 | 12780.1 |
Pathways
12367 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





