Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | BE104 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1176476 bp
Thymine Count
1174817 bp
Guanine Count
1212144 bp
Cytosine Count
1211685 bp
Genome Length
4775122 bp
Protein-coding Genes
4377 genes
Non-Coding Genes
324 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| lipopolysaccharide heptosyltransferase rfac | FGC38_RS19325 | Not Available | Positive | 3926810 - 3927769 | 35545.7 |
| o-antigen ligase | FGC38_RS19330 | Not Available | Positive | 3927779 - 3929038 | 46880.5 |
| glycosyltransferase family 9 protein | FGC38_RS19335 | Not Available | Negative | 3929070 - 3930143 | 41731.7 |
| 3-deoxy-d-manno-oct-2-ulosonate iii transferase waaz | FGC38_RS19340 | Not Available | Negative | 3930176 - 3931027 | 32921.9 |
| lipopolysaccharide core heptose(ii) kinase rfay | FGC38_RS19345 | Not Available | Negative | 3931098 - 3931796 | 27462.6 |
| lipopolysaccharide 1,2-glucosyltransferase rfaj | FGC38_RS19350 | Not Available | Negative | 3931814 - 3932830 | 39042.4 |
| lipopolysaccharide 3-alpha-galactosyltransferase | FGC38_RS19355 | Not Available | Negative | 3932870 - 3933889 | 39425.2 |
| lipopolysaccharide 1,6-galactosyltransferase | FGC38_RS19360 | Not Available | Negative | 3933889 - 3934968 | 40828.1 |
| lps core biosynthesis protein rfas | FGC38_RS19365 | Not Available | Negative | 3935012 - 3935947 | 36732.5 |
| lipopolysaccharide core heptose(i) kinase rfap | FGC38_RS19370 | Not Available | Negative | 3935984 - 3936781 | 30874.2 |
Pathways
12367 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





