Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | BE104 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1176476 bp
Thymine Count
1174817 bp
Guanine Count
1212144 bp
Cytosine Count
1211685 bp
Genome Length
4775122 bp
Protein-coding Genes
4377 genes
Non-Coding Genes
324 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| yhch/yjgk/yial family protein | FGC38_RS19065 | Not Available | Positive | 3874574 - 3875041 | 17550.2 |
| 2,3-diketo-l-gulonate trap transporter small permease yiam | FGC38_RS19070 | Not Available | Positive | 3875159 - 3875632 | 17516.9 |
| 2,3-diketo-l-gulonate trap transporter large permease yian | FGC38_RS19075 | Not Available | Positive | 3875635 - 3876912 | 45371.0 |
| 2,3-diketo-l-gulonate trap transporter substrate-binding protein yiao | FGC38_RS19080 | Not Available | Positive | 3876925 - 3877911 | 35972.1 |
| l-xylulokinase | FGC38_RS19085 | Not Available | Positive | 3877915 - 3879411 | 55158.0 |
| 3-keto-l-gulonate-6-phosphate decarboxylase ulad | FGC38_RS19090 | Not Available | Positive | 3879408 - 3880070 | 23446.1 |
| l-ribulose-5-phosphate 3-epimerase | FGC38_RS19095 | Not Available | Positive | 3880063 - 3880923 | 32456.9 |
| l-ribulose-5-phosphate 4-epimerase | FGC38_RS19100 | Not Available | Positive | 3880917 - 3881612 | 25562.3 |
| hypothetical protein | FGC38_RS23595 | Not Available | Negative | 3881644 - 3881745 | 3996.7 |
| hypothetical protein | FGC38_RS19105 | Not Available | Positive | 3881749 - 3881937 | 7103.24 |
Pathways
12367 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





