Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | BE104 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1176476 bp
Thymine Count
1174817 bp
Guanine Count
1212144 bp
Cytosine Count
1211685 bp
Genome Length
4775122 bp
Protein-coding Genes
4377 genes
Non-Coding Genes
324 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| autotransporter outer membrane beta-barrel domain-containing protein | FGC38_RS18925 | Not Available | Negative | 3845124 - 3845822 | 25952.1 |
| dna-3-methyladenine glycosylase i | FGC38_RS18930 | Not Available | Positive | 3845980 - 3846543 | 21101.2 |
| n-acetyltransferase | FGC38_RS18935 | Not Available | Positive | 3846540 - 3846980 | 17104.8 |
| hypothetical protein | FGC38_RS23435 | Not Available | Negative | 3847073 - 3847225 | 5399.26 |
| ompa family lipoprotein | FGC38_RS18940 | Not Available | Positive | 3847378 - 3848037 | 22198.6 |
| glyoxylate/hydroxypyruvate reductase ghrb | FGC38_RS18945 | Not Available | Positive | 3848141 - 3849115 | 35397.5 |
| duf3053 domain-containing protein | FGC38_RS18950 | Not Available | Negative | 3849165 - 3849875 | 25664.5 |
| hth-type transcriptional regulator | FGC38_RS18955 | Not Available | Positive | 3850309 - 3850599 | 11033.5 |
| rna chaperone/antiterminator cspa | FGC38_RS18960 | Not Available | Positive | 3850880 - 3851092 | 7403.66 |
| protein ysae | FGC38_RS23590 | Not Available | Positive | 3851231 - 3851302 | 2605.32 |
Pathways
12367 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





